| 2026-09-22 | Cleylton | Persis Solo → Java United | Transfer |
| 2026-09-20 | Vico | Java United → Persis Solo | Transfer |
| 2026-09-20 | Lukas Brambilla | Al Fahaheel → Java United | Free agent |
| 2026-09-20 | Vander | Maranhão → Java United | Free agent |
| 2026-08-30 | Syahrul Ramadhani | Java United → Java United | Free agent |
| 2026-08-27 | W. Angulo | Java United → Persis Solo | Free agent |
| 2026-08-25 | Y. Roni | Bali United → Java United | Free agent |
| 2026-08-25 | F. Sudin | PSIM Yogyakarta → Java United | Free agent |
| 2026-08-24 | Jonata Machado | Al Taee → Java United | Free agent |
| 2026-08-24 | Kaio Nunes | Pusamania Borneo → Java United | Free agent |
| 2026-08-23 | A. Oropa | Semen Padang → Java United | Free agent |
| 2026-08-23 | M. Firly | Barito Putera → Java United | Transfer |
| 2026-08-22 | R. Lauhin | Java United → Persis Solo | Free agent |
| 2026-08-22 | C. Margono | Persija → Java United | Loan |
| 2026-08-22 | Jorge | Ceara → Java United | Free agent |
| 2026-08-15 | A. Wadil | Malut United → Persijap | Free agent |
| 2026-08-11 | Lucas Cardoso Soares | Java United → Hougang United | Transfer |
| 2026-08-09 | Rizky Pellu | Java United → Deltras | Free agent |
| 2026-08-08 | Tyronne | Java United → Persita | Free agent |
| 2026-08-07 | R. Lastori | Java United → Tornado Pekanbaru | Free agent |
| 2026-08-05 | F. Wahyu | Java United → Tornado Pekanbaru | Free agent |
| 2026-07-31 | C. Gomis | Uthai Thani → Java United | Free agent |
| 2026-07-31 | K. Hirose | Pusamania Borneo → Java United | Free agent |
| 2026-07-21 | Igor Inocêncio | Java United → Cuiaba | Free agent |
| 2026-07-17 | Tyronne | Java United → Persita | Free agent |
| 2026-07-15 | R. Lastori | Java United → Tornado Pekanbaru | Free agent |
| 2026-07-08 | A. Lestaluhu | Malut United → PSIS Semarang | Free agent |
| 2026-07-06 | M. Lestusen | Malut United → PSMS Medan | Free agent |
| 2026-07-06 | S. David | Java United → Garudayaksa | Free agent |
| 2026-07-06 | A. Slamat | Java United → Semen Padang | Free agent |
| 2026-07-06 | A. Saputro | Java United → Persepam Madura Utd | Free agent |
| 2026-06-30 | S. Tahar | Malut United → Semen Padang | Free agent |
| 2026-06-30 | I. Lestaluhu | PSPS → Java United | Free agent |
| 2026-06-30 | Syahrul Ramadhani | Malut United → Persebaya Surabaya | Free agent |
| 2026-06-29 | Igor Inocêncio | Malut United → Igor Inocencio | Free agent |
| 2026-06-29 | Faras Sangaji | Java United → Sangaji Faras | Free agent |
| 2026-06-29 | Syahrul Ramadhani | Java United → Java United | Free agent |
| 2026-06-29 | Mardani Majid | Java United → Majid Mardani | Free agent |
| 2026-06-29 | A. Kurung | Persiraja Banda Aceh → Java United | Return from loan |
| 2026-06-29 | R. Lauhin | Malut United → Lauhin Riswan | Free agent |
| 2026-06-29 | A. Wadil | PSMS Medan → Malut United | Return from loan |
| 2026-06-29 | M. Drajad | Java United → Persib Bandung | Return from loan |
| 2026-06-29 | F. Wahyu | Malut United → Wahyu Fredyan | Free agent |
| 2026-06-29 | R. Lastori | PSMS Medan → Java United | Return from loan |
| 2026-06-29 | H. A. Syafiq A. | Java United → Syafiq Al Habsyi Ali | Free agent |
| 2026-05-30 | Vico | Dewa United → Malut United | Return from loan |
| 2026-05-30 | Chechu Meneses | Persik Kediri → Malut United | Return from loan |
| 2026-05-30 | R. Ardiansyah | Persebaya Surabaya → Malut United | Return from loan |
| 2026-05-30 | R. Togubu | PSMS Medan → Malut United | Return from loan |
| 2026-05-30 | R. Salmon | Persiku Kudus → Java United | Return from loan |
| 2026-02-04 | R. Ardiansyah | Malut United → Persebaya Surabaya | Loan |
| 2026-01-26 | Rizky Pellu | PSM Makassar → Malut United | Free agent |
| 2026-01-18 | Lucas Cardoso Soares | Dobrudzha → Malut United | Transfer |
| 2026-01-16 | R. Salmon | Java United → Persiku Kudus | Loan |
| 2026-01-14 | Chechu Meneses | Malut United → Persik Kediri | Loan |
| 2026-01-13 | Vico | Malut United → Dewa United | Loan |
| 2026-01-10 | R. Togubu | Malut United → PSMS Medan | Loan |
| 2026-01-10 | R. Salmon | Bekasi City → Malut United | Return from loan |
| 2026-01-09 | A. Wadil | Malut United → PSMS Medan | Loan |
| 2026-01-09 | R. Togubu | Bekasi City → Malut United | Return from loan |
1JorgeGoalkeeper · 24
93C. MargonoGoalkeeper · 24
33M. SaputraGoalkeeper · 29
3CleyltonDefender · 33
85M. FirlyDefender · 26
6C. GomisDefender · 27
4Gustavo FrançaDefender · 29
96M. IksanDefender · 22
35A. KurungDefender · 20
96I. LestaluhuDefender · 26
23Y. SayuriDefender · 28
10Lukas BrambillaMidfielder · 30
8K. HiroseMidfielder · 29
5Jonata MachadoMidfielder · 26
25Galang RamadhanMidfielder
22Syahrul RamadhaniMidfielder · 18
18Afgan RisahonduaMidfielder
68T. SetiawanMidfielder · 21
88F. SudinMidfielder · 25
56R. SyuhadaMidfielder · 21
28VanderMidfielder · 27
14R. ArdiansyahAttacker · 29
80A. BernadusAttacker · 20
21F. ButuanAttacker · 29
7CiroAttacker · 36
70GustavoAttacker · 29
9Kaio NunesAttacker · 29
77A. OropaAttacker · 22
11Y. RoniAttacker · 30
19T. RustamAttacker · 20
34Lintar SadewaAttacker
99R. SalmonAttacker · 20
12Yance SayuriAttacker · 28
17D. da SilvaAttacker · 35